FastQCFastQC Report
Thu 28 Oct 2021
SRR10070132_1.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR10070132_1.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences50654
Sequences flagged as poor quality0
Sequence length35-250
%GC53

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN876517.303668022268724No Hit
GTGTCAGCAGCCGCGGTAATACGTAGGGTGCGAGCGTTAATCGGAATTAC653012.891380739921823No Hit
GTGTCAGCAGCCGCGGTAATACAGAGGGTGCGAGCGTTAATCGGATTTAC28985.721167133888735No Hit
GTGTCAGCAGCCGCGGTAATACAGAGGGTGCAAGCGTTAATCGGAATTAC20274.001658309314171No Hit
GTGTCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTAATCGGAATTAC17843.521933114857662No Hit
GTGCCAGCAGCCGCGGTAATACGTAGGGTGCGAGCGTTAATCGGAATTAC11042.179492241481423No Hit
GTGTCAGCAGCCGCGGTAAAACCAGCACCTCAAGTGGTCAGGATGATTAT9891.9524617996604414No Hit
GTGTCAGCCGCCGCGGTAATACGTAGGGTGCGAGCGTTAATCGGAATTAC6261.2358352746081258No Hit
GTGTCAGCAGCCGCGGTAATACGTAGGTGGCAAGCGTTGTCCGGAATTAT6101.204248430528685No Hit
GTGTCAGCAGCCGCGGTAATACGGAGGTGGCAAGCGTTACTCGGATTTAT5981.1805582974691042No Hit
GTGCCAGCAGCCGCGGTAATACAGAGGGTGCGAGCGTTAATCGGATTTAC5311.0482883878864453No Hit
GTGTCAGCAGCCGCGGTAAGACAGAGGTGGCAAGCGTTGTTCGGATTTAC3430.6771429699530146No Hit
GTGCCAGCAGCCGCGGTAATACAGAGGGTGCAAGCGTTAATCGGAATTAC3310.6534528368934339No Hit
GTGTCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTACTCGGAATCAC3150.621865992813993No Hit
GTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTAATCGGAATTAC2920.5764599044497967No Hit
GTGTCAGCAGCCGCGGTAATACAGAGGGTGCAAGCGTTAATCGGATTTAC2800.552769771390216No Hit
GTGTCAGCCGCCGCGGTAATACAGAGGGTGCGAGCGTTAATCGGATTTAC2760.5448730603703558No Hit
GTGTCAGCAGCCGCGGTAATACCAGCACCTCGAGTGGTCAGGAGGTTTAT2610.5152603940458799No Hit
GTGTCAGCAGCCGCGGTAATACGGAGGGAGCTAGCGTTGTTCGGAATTAC2490.4915702609862992No Hit
GTGTCAGCAGCCGCGGTAAGACATAGGTGGCAAGCGTTATTCGGAATTAC2300.4540608836419631No Hit
GTGTCAGCCGCCGCGGTAATACAGAGGGTGCAAGCGTTAATCGGAATTAC2160.42642239507245233No Hit
GTGTCAGCAGCCGCGGTGATACGTAGGGTGCGAGCGTTGTCCGGATTTAT2130.42049986180755716No Hit
GTGTCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTAATCGGAATTAC2100.414577328542662No Hit
GTGTCAGCCGCCGCGGTAAAACCAGCACCTCAAGTGGTCAGGATGATTAT2060.40668061752280177No Hit
GTGTCAGCAGCCGCGGTAATACGGAGGGTGCGAGCGTTAATCGGAATTAC1960.3869388399731512No Hit
GTGTCAGCCGCCGCGGTAATACGTAGGGTGCAAGCGTTAATCGGAATTAC1800.35535199589371025No Hit
GTGTCAGCAGCCGCGGTAATACCAGCACCTCGAGTGGTTAGGAGGTTTAT1700.3356102183440597No Hit
GTGTCAGCAGCCGCGGTCATACGTAGGGTGCAAGCATTATCCGGAGTGAC1660.32771350732419946No Hit
GTGTCAGCAGCCGCGGTCATACGGAGGATCCAAGCGTTATCCGGAATTAC1650.3257393295692344No Hit
GTGCCAGCAGCCGCGGTAAAACCAGCACCTCAAGTGGTCAGGATGATTAT1570.30994590752951395No Hit
GTGTCAGCAGCCGCGGTAATACAGAGGGTGCGAGCGTTAATCGGAATTAC1470.2902041299798634No Hit
GTGTCAGCAGCCGCGGTAACCCAGGAGCCACAAGTGGCAACCACCTTTAT1460.28822995222489833No Hit
GTGTCAGCAGCCGCGGTAATACGTAGGTGGCAAGCGTTGTCCGGATTTAT1390.27441070794014294No Hit
GTGTCAGCAGCCGCGGTAATACAGAGACTGCAAGCGTTATTCGGATTCAC1360.26848817467524777No Hit
GTGTCAGCAGCCGCGGTAATACGGAGGGTGCGAGCGTTAATCGGATTTAC1340.26453981916531766No Hit
GTGTCAGCAGCCGCGGTAATACGTAGGGTCCAAGCGTTAATCGGAATTAC1260.2487463971255972No Hit
GTGTCAGCAGCCGCGGTAATACGAAGGGGGCTAGCGTTGCTCGGAATTAC1260.2487463971255972No Hit
GTGTCAGCAGCCGCGGTAATACGAAGGGGGCTAGCGTTGTTCGGAATTAC1170.23097879733091167No Hit
GTGTCAGCAGCCGCGGTAATACGGGGGGGGCAAGCGTTGTTCGGAATTAC1160.22900461957594664No Hit
GTGTCAGCAGCCGCGGTCATACGTAGGACCCAAGCGTTATCCGGAGTGAC1140.22505626406601648No Hit
GTGCCAGCAGCCGCGGTAATACGGAGGTGGCAAGCGTTACTCGGATTTAT1120.2211079085560864No Hit
GTGTCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTATCCGGATTCAC1090.2151853752911912No Hit
GTGCCAGCCGCCGCGGTAATACGTAGGGTGCGAGCGTTAATCGGAATTAC1030.20334030876140088No Hit
GTGTCAGCAGCCGCGGTAATACGAAGGGTGCAAGCGTTACTCGGAATTAC1000.19741777549650572No Hit
GTGTCAGCAGCCGCGGTAAGACGTAGGGGGCGAGCGTTGTCCGGATTCAC980.1934694199865756No Hit
GTGTCAGCAGCCGCGGTAATACGTAGGGTGCGAGCGTTGTCCGGAATTAC950.1875468867216804No Hit
GTGTCAGCAGCCGCGGTAATACAGAGGGGGCAAGCGTTGTTCGGAATTAC920.18162435345678526No Hit
GTGTCAGCAGCCGCGGTAATACGGAGGGGGCTAGCGTTGTTCGGAATTAC890.17570182019189007No Hit
GTGTCAGCAGCCGCGGTAATACCAGCACCCCGAGTGGTCGGGACGATTAT860.1697792869269949No Hit
GTGTCAGCAGCCGCGGTAATACGGAGGGTGCGAGCGTTGTCCGGAATCAC840.1658309314170648No Hit
GTGTCAGCAGCCGCGGTAATACGAAGGTGGCAAGCGTTATTCGGATTTAC830.16385675366209973No Hit
GTGTCAGCAGCCGCGGTAATACGAAGGGGGCTAGCGTTGTTCGGATTTAC800.15793422039720456No Hit
GTGTCAGCAGCCGCGGTAATACAGAGGTGGCAAGCGTTGTTCGGAATTAC790.1559600426422395No Hit
GTGCCAGCAGCCGCGGTAATACGTAGGTGGCAAGCGTTGTCCGGAATTAT780.15398586488727445No Hit
GTGTCAGCAGCCGCGGTAATACCAGCTCCTCGAGTGGTCGGGGCGATTAT770.1520116871323094No Hit
GTGTCAGCAGCCGCGGTAATACGGAGGATCCAAGCGTTATCCGGATTTAT770.1520116871323094No Hit
GTGTCAGCAGCCGCGGTAATACCTGCAGCCCGAGTGGTGCTCGTTATTAT760.15003750937734434No Hit
GTGTCAGCAGCCGCGGTAAGACGTAGGGGGCGAGCGTTGTTCGGATTTAC740.14608915386741422No Hit
GTGTCAGCAGCCGCGGTAATACGGAGGGGGCTAGCGTTATTCGGAATTAC710.14016662060251905No Hit
GTGTCAGCAGCCGCGGTAATACAGGTAGCACAAGTAGTATCCACGAATAT670.13226990958265883No Hit
GTGTCAGCCGCCGCGGTAATACCAGCACCTCGAGTGGTCAGGAGGTTTAT670.13226990958265883No Hit
GTGTCAGCAGCCGCGGTAAGACGAGGGATCCTAGCGTTGTTCGGAATTAT670.13226990958265883No Hit
GTGTCAGCAGCCGCGGTAATACAGAGGGTGCGAGCGTTGTCCGGAATCAC660.13029573182769374No Hit
GTGTCAGCAGCCGCGGTAATACGAAGGGGGCTAGCGTTGCTCGGAATCAC660.13029573182769374No Hit
GTGTCAGCAGCCGCGGTAATACGAAGGGTGCAAGCGTTAATCGGAATTAC650.12832155407272872No Hit
GTGTCAGCAGCCGCGGTAATACGTAGGGGGCGAGCGTTGTTCGGATTTAC640.12634737631776366No Hit
GTGTCAGCAGCCGCGGTAATACGTAGGTGGCAAGCGTTGTCCGGATTTAC630.1243731985627986No Hit
GTGTCAGCAGCCGCGGTAATACGTAGGGTGCGAGCGTTAATCGGAATTAT630.1243731985627986No Hit
GTGTCAGCCGCCGCGGTAATACGTAGGTGGCAAGCGTTGTCCGGAATTAT630.1243731985627986No Hit
GTGTCAGCAGCCGCGGTAATACGAGAGGTCCAAGCGTTATCCGGATTTAC610.12042484305286848No Hit
GTGTCAGCAGCCGCGGTAAGACAGAGGGGGCAAGCGTTGCTCGGAATTAC600.11845066529790342No Hit
GTGTCAGCAGCCGCGGTAATACGTAGGGTGCAGGCGTTAATCGGAATTAC600.11845066529790342No Hit
GTGTCAGCAGCCGCGGTAATACAGAGGTGGCGAGCGTTACTCGGATTTAT600.11845066529790342No Hit
GTGCCAGCAGCCGCGGTAATACCAGCACCTCGAGTGGTCAGGAGGTTTAT590.11647648754293836No Hit
GTGTCAGCAGCCGCGGTAAGACAGAGGATGCAAGCGTTATCCGGAATGAT560.1105539542780432No Hit
GTGTCAGCAGCCGCGGTAATACGTAGGGTGCGAGCGTTAATCGGATTTAC550.10857977652307814No Hit
GTGTCAGCCGCCGCGGTAATACCAGCACCTCGAGTGGTTAGGAGGTTTAT540.10660559876811308No Hit
GTGTCAGCAGCCGCGGTAATACAGAGGGTGCTAGCGTTAATCGGATTTAC540.10660559876811308No Hit
GTGTCAGCAGCCGCGGTAAAACGTAGGACACGAGCGTTATCCGGAGTTAC530.10463142101314801No Hit
GTGTCAGCAGCCGCGGTCATACGGAGGGTCCAAGCGTTATCCGGAATTAC520.10265724325818296No Hit
GTGTCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTATCCGGATTTAT520.10265724325818296No Hit
GTGTCAGCAGCCGCGGTAAGACGTAGGATGCAAGCGTTACTCGGAATCAC510.10068306550321791No Hit
GTGTCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTATCCGGAATTAT510.10068306550321791No Hit

[OK]Adapter Content

Adapter graph