FastQCFastQC Report
Thu 28 Oct 2021
SRR10070141_1.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR10070141_1.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences83833
Sequences flagged as poor quality0
Sequence length35-250
%GC54

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGTCAGCAGCCGCGGTAATACGTAGGGTGCGAGCGTTAATCGGAATTAC1717220.483580451612134No Hit
GTGCCAGCAGCCGCGGTAATACGTAGGGTGCGAGCGTTAATCGGAATTAC33103.9483258382737105No Hit
GTGTCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTAATCGGAATTAC31103.7097563012178973No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN23382.7888778881824576No Hit
GTGTCAGCAGCCGCGGTAAAACCAGCACCTCAAGTGGTCAGGATGATTAT23312.7805279543855046No Hit
GTGTCAGCCGCCGCGGTAATACGTAGGGTGCGAGCGTTAATCGGAATTAC16621.9825128529338087No Hit
GTGTCAGCAGCCGCGGTAATACGGAGGTGGCAAGCGTTACTCGGATTTAT16611.9813200052485298No Hit
GTGTCAGCAGCCGCGGTAATACAGAGGGTGCGAGCGTTAATCGGAATTAC12811.5280378848424845No Hit
GTGTCAGCAGCCGCGGTAATACGGAGGGAGCTAGCGTTGTTCGGAATTAC9391.1200839764770436No Hit
GTGTCAGCAGCCGCGGTAATACAGAGGGTGCAAGCGTTAATCGGAATTAC9251.1033841088831366No Hit
GTGTCAGCAGCCGCGGTCATACGTAGGGTGCAAGCATTATCCGGAGTGAC6740.8039793398780909No Hit
GTGTCAGCAGCCGCGGTAAGACAGAGGTGGCAAGCGTTGTTCGGATTTAC6380.7610368232080446No Hit
GTGTCAGCCGCCGCGGTAAAACCAGCACCTCAAGTGGTCAGGATGATTAT6060.7228656972791144No Hit
GTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTAATCGGAATTAC5670.6763446375532308No Hit
GTGTCAGCAGCCGCGGTAAGACGTAGGGGGCGAGCGTTGTTCGGATTTAC5670.6763446375532308No Hit
GTGTCAGCAGCCGCGGTAATACAGAGGGTGCGAGCGTTAATCGGATTTAC5140.6131237102334403No Hit
GTGTCAGCAGCCGCGGTAATACGGAGGGTGCGAGCGTTAATCGGAATTAC5110.6095451671776031No Hit
GTGCCAGCAGCCGCGGTAAAACCAGCACCTCAAGTGGTCAGGATGATTAT4690.5594455643958823No Hit
GTGTCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTATCCGGATTCAC4650.554674173654766No Hit
GTGTCAGCAGCCGCGGTAATACGGAGGGGGCTAGCGTTGTTCGGAATTAC4210.5021888755024871No Hit
GTGTCAGCAGCCGCGGTAATACAGAGACTGCAAGCGTTATTCGGATTCAC3900.46521059725883596No Hit
GTGTCAGCAGCCGCGGTAATACCAGCACCTCGAGTGGTTAGGAGGTTTAT3770.44970357735020816No Hit
GTGCCAGCAGCCGCGGTAATACGGAGGTGGCAAGCGTTACTCGGATTTAT3600.42942516670046404No Hit
GTGTCAGCAGCCGCGGTAATACCAGCACCTCGAGTGGTCAGGAGGTTTAT3520.4198823852182315No Hit
GTGTCAGCCGCCGCGGTAATACGTAGGGTGCAAGCGTTAATCGGAATTAC3440.410339603735999No Hit
GTGTCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTAATCGGAATTAC3410.40676106068016177No Hit
GTGTCAGCAGCCGCGGTAAGACATAGGTGGCAAGCGTTATTCGGAATTAC2880.3435401333603712No Hit
GTGCCAGCCGCCGCGGTAATACGTAGGGTGCGAGCGTTAATCGGAATTAC2780.33161165650758057No Hit
GTGTCAGCAGCCGCGGTAATACGGGGGGGGCAAGCGTTGTTCGGAATTAC2760.3292259611370224No Hit
GTGTCAGCAGCCGCGGTAATACGTAGGGTGCAGGCGTTAATCGGAATTAC2700.32206887502534803No Hit
GTGTCAGCAGCCGCGGTAATACAGAGGTGGCAAGCGTTGTTCGGAATTAC2680.3196831796547899No Hit
GTGTCAGCAGCCGCGGTAATACGTAGGGTGCGAGCGTTGTCCGGAATTAC2460.2934405305786504No Hit
GTGTCAGCAGCCGCGGTAATACGAAGGGGGCTAGCGTTGTTCGGAATTAC2380.2838977490964179No Hit
GTGCCAGCAGCCGCGGTAATACAGAGGGTGCGAGCGTTAATCGGAATTAC2370.2827049014111388No Hit
GTGTCAGCAGCCGCGGTAATACAGAGGGGGCAAGCGTTGTTCGGAATTAC2280.2719692722436272No Hit
GTGTCAGCAGCCGCGGTCATACGGAGGATCCAAGCGTTATCCGGAATTAC2000.23856953705581335No Hit
GTGTCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTGTTCGGAATTAC1970.23499099399997614No Hit
GTGTCAGCAGCCGCGGTAACCCAGGAGCCACAAGTGGCAACCACCTTTAT1920.2290267555735808No Hit
GTGTCAGCAGCCGCGGTAATACAGAGGTGGCGAGCGTTACTCGGATTTAT1900.2266410602030227No Hit
GTGCCAGCAGCCGCGGTAATACGGAGGGAGCTAGCGTTGTTCGGAATTAC1850.22067682177662734No Hit
GTGCCAGCAGCCGCGGTAATACAGAGGGTGCAAGCGTTAATCGGAATTAC1780.21232688797967386No Hit
GTGTCAGCAGCCGCGGTAATACGTAGGTGGCAAGCGTTGTCCGGATTTAT1710.2039769541827204No Hit
GTGTCAGCAGCCGCGGTAATACGTAGGGTGCGAGCGTTAATCGGAATTAT1680.20039841112688322No Hit
GTGTCAGCAGCCGCGGTAATACAGAGGGTGCAAGCGTTAATCGGATTTAC1570.18727708658881348No Hit
GTGTCAGCAGCCGCGGTAATACGAAGGTGGCAAGCGTTGTTCGGATTTAC1560.1860842389035344No Hit
GTGTCAGCAGCCGCGGTCATACGTAGGACCCAAGCGTTATCCGGAGTGAC1550.18489139121825535No Hit
GTGTCAGCCGCCGCGGTAATACGGAGGTGGCAAGCGTTACTCGGATTTAT1540.18369854353297627No Hit
GTGTCAGCAGCCGCGGTAATACGTAGGTGGCAAGCGTTGTCCGGATTTAC1510.18012000047713908No Hit
GTGTCAGCAGCCGCGGTAAGACAGAGGTGGCAAGCGTTGTTCGGATTTAT1490.17773430510658095No Hit
GTGTCAGCAGCCGCGGTAATACGTAGGGTGCGAGCGTTAATCGGATTTAC1470.17534860973602281No Hit
GTGTCAGCAGCCGCGGTAAGACAGAGGGGGCAAGCGTTGCTCGGAATTAC1430.17057721899490652No Hit
GTGTCAGCAGCCGCGGTAATACGAAGGGGGCTAGCGTTGCTCGGAATTAC1350.16103443751267402No Hit
GTGCCAGCAGCCGCGGTCATACGTAGGGTGCAAGCATTATCCGGAGTGAC1350.16103443751267402No Hit
GTGTCAGCAGCCGCGGTAATACCTGCAGCCCGAGTGGTGCTCGTTATTAT1300.15507019908627867No Hit
GTGTCAGCAGCCGCGGTAATACGGAGGATCCAAGCGTTATCCGGAATCAT1300.15507019908627867No Hit
GTGTCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTGTTCGGAATTAT1290.1538773514009996No Hit
GTGTCAGCCGCCGCGGTAATACAGAGGGTGCGAGCGTTAATCGGAATTAC1270.15149165603044146No Hit
GTGCCAGCAGCCGCGGTAAGACAGAGGTGGCAAGCGTTGTTCGGATTTAC1200.143141722233488No Hit
GGGTCAGCAGCCGCGGTAATACGTAGGGTGCGAGCGTTAATCGGAATTAC1160.13837033149237174No Hit
GTGTCAGCAGCCGCGGTAATACGAAGGGTGCTAGCGTTGTTCGGAATTAT1150.1371774838070927No Hit
GTGCCAGCAGCCGCGGTAAGACGTAGGGGGCGAGCGTTGTTCGGATTTAC1150.1371774838070927No Hit
GTGCCGGCAGCCGCGGTAATACGTAGGGTGCGAGCGTTAATCGGAATTAC1110.1324060930659764No Hit
GTGCCAGCAGCCGCGGTAATACGGAGGGGGCTAGCGTTGTTCGGAATTAC1040.12405615926902294No Hit
GTGTCAGCAGCCGCGGTAATACGGAGGATCCAAGCGTTATCCGGATTTAT1040.12405615926902294No Hit
GTGTCAGCAGCCGCGGTAATACCAGCACCCCGAGTGGTCGGGACGATTAT1020.12167046389846481No Hit
GTGTCAGCAGCCGCGGTAATACAGAGGGTGCAAGCGTTGTTCGGAATTAC1010.12047761621318574No Hit
GTGTCAGCAGCCGCGGTAAGACAGAGGTGGCGAGCGTTGTTCGGAATTAC1010.12047761621318574No Hit
GTGTCAGCAGCCGCGGTAATACGAAGGGGGCTAGCGTTGCTCGGAATCAC1000.11928476852790668No Hit
GTGTCAGCCGCCGCGGTAATACCAGCACCTCGAGTGGTTAGGAGGTTTAT1000.11928476852790668No Hit
GTGTCAGCAGCCGCGGTAATACATACTGTGCGAACGTTATTCGGATTCAC990.11809192084262761No Hit
GTGTCAGCCGCCGCGGTAATACCAGCACCTCGAGTGGTCAGGAGGTTTAT990.11809192084262761No Hit
GTGTCAGCAGCCGCGGTAATACGTAGGGGGCGAGCGTTAATCGGAATTAC990.11809192084262761No Hit
GTGTCAGCAGCCGCGGTAATACAGAGGTGGCAAGCGTTGTTCGGATTCAT990.11809192084262761No Hit
GTGTCAGCAGCCGCGGTAATACGAAGGGTGCAAGCGTTACTCGGAATTAC980.11689907315734853No Hit
GTGTCAGCAGCCGCGGTAATACGAGGGCGCCAAGCGTTATCCGGATTTAT980.11689907315734853No Hit
GTGTCAGCAGCCGCGGTAATACGGGGGTGGCAAGCGTTACTCGGATTTAT960.1145133777867904No Hit
GTGTCAGCAGCCGCGGTAATACGTAGGTGGCAAGCGTTGTCCGGAATTAT920.10974198704567413No Hit
GTGTCAGCAGCCGCGGTAATACGTAGGGGGCGAGCGTTGTTCGGATTTAC910.10854913936039506No Hit
GTGCCAGCCGCCGCGGTAAAACCAGCACCTCAAGTGGTCAGGATGATTAT890.10616344398983693No Hit
GTGTCAGCAGCCGCGGTAATACAGAGGGTGCAAGCGTTAATCGGAGTTAC890.10616344398983693No Hit
GTGTCAGCAGCCGCGGTAATACGAAGGTGGCAAGCGTTATTCGGATTTAC870.1037777486192788No Hit
GTGCCAGCAGCCGCGGTAATACAGAGGGTGCGAGCGTTAATCGGATTTAC860.10258490093399975No Hit
GTGTCAGCAGCCGCGGTAATACGGAGGGTGCGAGCGTTGTCCGGAATCAC850.10139205324872066No Hit
GTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTATCCGGATTCAC850.10139205324872066No Hit

[OK]Adapter Content

Adapter graph