FastQCFastQC Report
Mon 16 Feb 2026
SAMPLE_FASTQ_RNA_1.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSAMPLE_FASTQ_RNA_1.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1569
Total Bases158.4 kbp
Sequences flagged as poor quality0
Sequence length101
%GC60

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTGGAAGACGAGCGGGCCGCGGTGGACACCTACTGCAGACACAACTACG40.25493945188017847No Hit
CTCCGATCACCAATGTACCTCCAGAGGTAACTGTGCTCACGAACAGCCCT40.25493945188017847No Hit
GTGGTCGCTGCTGTGATGTGGAGGAGGAAGAGCTCAGATAGAAAAGGAGG40.25493945188017847No Hit
CAGCACCACAACCTCCTGGTCTGTTCTGTGAGTGGTTTCTATCCAGGCAG30.19120458891013384No Hit
AGGATGTACGGCTGCGACGTGGGGCCGGACGGGCGCCTCCTCCGCGGGCA30.19120458891013384No Hit
CTTCCCAGCCCACCATCCCCATCGTGGGCATCATTGCTGGCCTGGTTCTC30.19120458891013384No Hit
TACATCGCCTTGAACGAGGACCTGCGCTCTTGGACCGCGGCGGACATGGC30.19120458891013384No Hit
ACTGGGAGTTTGATGCTCCAAGCCCTCTCCCAGAGACTACAGAGAACGTG30.19120458891013384No Hit
GCATTGGCCAACATAGCTGTGGACAAAGCCAACCTGGAAATCATGACAAA30.19120458891013384No Hit
GAGTTCTATCTGAATCCTGACCAATCAGGCGAGTTTATGTTTGACTTTGA30.19120458891013384No Hit
CTGCGGAACCTGCGCGGCTACTACAACCAGAGCGAGGCCGGGTCTCACAT30.19120458891013384No Hit
GGGAGGACCAGACCCAGGACACGGAGCTCGTGGAGACCAGGCCTGCAGGG30.19120458891013384No Hit
GAAGAATGGGAAGGAGACGCTGCAGCGCGCGGAACACCCAAAGACACACG30.19120458891013384No Hit
CTGTGATGTGGAGGAGGAAGAGCTCAGATAGAAAAGGAGGGAGCTACTCT30.19120458891013384No Hit
ATGACTCACCACGCTGTCTCTGACCATGAGGCCACCCTGAGGTGCTGGGC30.19120458891013384No Hit
CCGAGATGCGGGTCACGGCACCCCGAACCGTCCTCCTGCTGCTCTCGGCG30.19120458891013384No Hit
TGGGACCGGAACACACGGAATGTGAAGGCCCAGTCACAGACTGACCGAGT30.19120458891013384No Hit
TCATCCAGGCCGAGTTCTATCTGAATCCTGACCAATCAGGCGAGTTTATG30.19120458891013384No Hit
GGCCGTCATGGCGCCCCGAACCCTCCTCCTGCTACTCTTGGGGGCCCTGG30.19120458891013384No Hit
CACACTGACCTGGCAGCGGGATGGCGAGGACCAAACTCAGGACACTGAGC30.19120458891013384No Hit
CCGAGATGCGGGTCACGGCGCCCCGAACCGTCCTCCTGCTGCTCTGGGGG30.19120458891013384No Hit
GGATGGCCGTCATGGCGCCCCGAACCCTCCTCCTGCTACTCTTGGGGGCC30.19120458891013384No Hit
CCCAGCCCACCATCCCCATCGTGGGCATCGTTGCTGGCCTGGCTGTCCTG30.19120458891013384No Hit
AGCTACTCTCAGGCTGCGTCCAGCGACAGTGCCCAGGGCTCTGATGTGTC30.19120458891013384No Hit
TCTGTGAGTGGTTTCTATCCAGGCAGCATTGAAGTCAGGTGGTTCCGGAA30.19120458891013384No Hit
TGGGGCTTGGATGAGCCTCTTCTCAAGCACTGGGAGTTTGATGCTCCAAG30.19120458891013384No Hit
TTGGACGATTTGCCAGCTTTGAGGCTCAAGGTGCATTGGCCAACATAGCT20.12746972594008923No Hit
GCTGGCCTGGCTGTCCTAGCAGTTGTGGTCATCGGAGCTGTGGTCGCTAC20.12746972594008923No Hit
GGACGATTTGCCAGCTTTGAGGCTCAAGGTGCATTGGCCAACATAGCTGT20.12746972594008923No Hit
CAGGTGGAAAAGGAGGGAGCTGCTCTCAGGCTGCGTCCAGCAACAGTGCC20.12746972594008923No Hit
CCACAACATGCGCCCTGAAGACAGAATGTTCCATATCAGAGCTGTGATCT20.12746972594008923No Hit
ACCAGGCCTGCAGGGGATGGAACCTTCCAGAAGTGGGTGGCTGTGGTGGT20.12746972594008923No Hit
GGAGACGCTGCAGCGCACGGACCCCCCCAAGACGCATATGACTCACCACG20.12746972594008923No Hit
GTGGACCTGGGGACCCTGCGCGGCTACTACAACCAGAGCGAGGCCGGTTC20.12746972594008923No Hit
GAGCCGCGGGCGCCGTGGATAGAGCAGGAGGGGCCGGAGTATTGGGACCG20.12746972594008923No Hit
CGTGGGCATCATTGCTGGCCTAGTTCTCTTTGGAGCTGTGTTCGCTGGAG20.12746972594008923No Hit
ATCATGGGCTATCAAAGAAGAACATGTGATCATCCAGGCCGAGTTCTATC20.12746972594008923No Hit
ACTGAGCTTGTGGAGACCAGACCAGCAGGAGATAGAACCTTCCAGAAGTG20.12746972594008923No Hit
GCCGAGTTCTATCTGAATCCTGACCAATCAGGCGAGTTTATGTTTGACTT20.12746972594008923No Hit
TGCCATGTACAGCATGAGGGGCTGCCGAAGCCCCTCACCCTGAGATGGGA20.12746972594008923No Hit
GGAGCTGCTCTCAGGCTGCGTCCAGCAACAGTGCCCAGGGCTCTGATGAG20.12746972594008923No Hit
GTACCTGGACCGCACCCCTCGCTGCCCACCCAGTGGTCTGTTGACTCCCT20.12746972594008923No Hit
CAGGAGGAAACAGCTGGGGTCGTGTCCACCAACCTGATCCGTAATGGAGA20.12746972594008923No Hit
ATGGCTGTGGCAAAACACAACTTGAACATCATGATTAAACGCTACAACTC20.12746972594008923No Hit
TGTGATCACTGGAGCTGTGGTCGCTGCTGTGATGTGGAGGAGGAAGAGCT20.12746972594008923No Hit
AGCTGTGGTGGTGCCTTCTGGAGAAGAGCAGAGATACACATGCCATGTAC20.12746972594008923No Hit
AGGATGGAGCCGCGGGCGCCGTGGATAGAGCAGGAGAGGCCTGAGTATTG20.12746972594008923No Hit
TGGAGGCTCCTGCATGGCAGTTCTGACAGTGACACTGATGGTGCTGAGCT20.12746972594008923No Hit
GGGATGGGGAGGACCAGACCCAGGACACGGAGCTCGTGGAGACCAGGCCT20.12746972594008923No Hit
GCCGAGGATGGCCGTCATGGCGCCCCGAACCCTCCTCCTGCTACTCTTGG20.12746972594008923No Hit
GCTGTGATGTGGAGGAGGAAGAGCTCAGATAGAAAAGGAGGGAGCTACTC20.12746972594008923No Hit
GAAGAGCTCAGATAGAAAAGGAGGGAGCTACTCTCAGGCTGCAAGCAGTG20.12746972594008923No Hit
TACCCTGCGGAGATCACACTGACCTGGCAGCGGGATGGCGAGGACCAAAC20.12746972594008923No Hit
CTCCAGAGGATGTACGGCTGCGACGTGGGGCCGGACGGGCGCCTCCTCCG20.12746972594008923No Hit
CCAAGCACAAGTGGGAGGCGGCCCATGTGGCGGAGCAGTGGAGAGCCTAC20.12746972594008923No Hit
GTGGAGGAGGAAGAGCTCAGATAGAAAAGGAGGGAGCTACTCTCAGGCTG20.12746972594008923No Hit
TCCTTGGATCTGTGGTCTCTGGAGCTGTGGTTGCTGCTGTGATATGGAGG20.12746972594008923No Hit
CTATGTGGATCTGGACAAGAAGGAGACCGTCTGGCATCTGGAGGAGTTTG20.12746972594008923No Hit
AGTTCTATCTGAATCCTGACCAATCAGGCGAGTTTATGTTTGACTTTGAT20.12746972594008923No Hit
CTGGCCTGGCTGTCCTAGCAGTTGTGGTCATCGGAGCTGTGGTCGCTGCT20.12746972594008923No Hit
GCTCTTGGACCGCGGCGGACATGGCGGCTCAGATCACCCAGCGCAAGTGG20.12746972594008923No Hit
AGCGCACGGACCCCCCCAAGACGCATATGACTCACCACGCTGTCTCTGAC20.12746972594008923No Hit
ACGGGAAGGAGACGCTGCAGCGCGCGGACCCCCCAAAGACACACGTGACC20.12746972594008923No Hit
TGCCTACAGTTCGAAGCTTTGCCAACGAGGAGGGCGAAGCCCAGAAGTTT20.12746972594008923No Hit
TGATGAGATTTTCCATGTGGATATGGCAAAGAAGGAGACGGTCTGGCGGC20.12746972594008923No Hit
AGCACAAGTGGGAGGCGGCCCATGTGGCGGAGCAGTGGAGAGCCTACCTG20.12746972594008923No Hit
CATGACAAAGCGCTCCAACTATACTCCGATCACCAATGTACCTCCAGAGG20.12746972594008923No Hit
CCCCCAGCAGGGAGACGTCTACATCTGCCAAGTGGAGCACACCAGCCTGG20.12746972594008923No Hit
GACAGATTTCTACCCAGGCAGCATTCAAGTCCGATGGTTCCTGAATGGAC20.12746972594008923No Hit
CATGAGGCCACCCTGAGGTGCTGGGCCCTGGGCTTCTACCCTGCGGAGAT20.12746972594008923No Hit
CACACAGACTTACCGAGAGAGCCTGCGGAACCTGCGCGGCTACTACAACC20.12746972594008923No Hit
CGGAGCTCGTGGAGACCAGGCCTGCAGGGGATGGAACCTTCCAGAAGTGG20.12746972594008923No Hit
AAGAGCTCAGGTGGAAAAGGAGGGAGCTGCTCTCAGGCTGCGTCCAGCAA20.12746972594008923No Hit
ACCGGGAGACACAGAAGTACAAGCGCCAGGCACAGACTGACCGAGTGAGC20.12746972594008923No Hit
CATGCCATGTACAGCATGAGGGGCTGCCGAAGCCCCTCACCCTGAGATGG20.12746972594008923No Hit
GTGGGGGAGTTCCGGGCGGTGACGGAGCTGGGGCGGCCTGATGCCGAGTA20.12746972594008923No Hit
TCACGTGGAGGAAGAACGGGAAGCTTGTCATGCCTCACAGCAGTGCGCAC20.12746972594008923No Hit
CGGTTCGACAGCGACGCCGCGAGCCAGAGGATGGAGCCGCGGGCGCCGTG20.12746972594008923No Hit
CCTGGAAATCATGACAAAGCGCTCCAACTATACTCCGATCACCAATGTAC20.12746972594008923No Hit
CCAGAAGTGGGTGGCTGTGGTGGTGCCTTCTGGACAGGAGCAGAGATACA20.12746972594008923No Hit
GCCATGTACAGCATGAGGGGCTGCCGAAGCCCCTCACCCTGAGATGGGAG20.12746972594008923No Hit
CTCAGACCACCAAGCACAAGTGGGAGGCGGCCCATGTGGCGGAGCAGTGG20.12746972594008923No Hit
TGGCTGTCCTAGCAGTTGTGGTCATCGGAGCTGTGGTCGCTGCTGTGATG20.12746972594008923No Hit
GCGCGGCTACTACAACCAGAGCGAGGCCGGTTCTCACACCATCCAGATGA20.12746972594008923No Hit
CTGGCCTGGCTGTCCTGGCTGTCCTAGCTGTCCTAGGAGCTGTGATGGCT20.12746972594008923No Hit
TGGCCTGGCTGTCCTAGCAGTTGTGGTCATCGGAGCTGTGGTCGCTGCTG20.12746972594008923No Hit
CCCCGTCTCTGACCATGAGGCCACCCTGAGGTGCTGGGCCCTGGGCTTCT20.12746972594008923No Hit
GGAAGAGCTCAGATAGAAAAGGAGGGAGCTACTCTCAGGCTGCAAGCAGT20.12746972594008923No Hit
CCAAGACGCATATGACTCACCACGCTGTCTCTGACCATGAGGCCACCCTG20.12746972594008923No Hit
CAGTCCTGTCACCGTGGAGTGGAAGGCACAGTCTGATTCTGCCCGGAGTA20.12746972594008923No Hit
CAGAAGTGGGCAGCTGTGGTGGTGCCTTCTGGAGAAGAGCAGAGATACAC20.12746972594008923No Hit
ATCCCCATCGTGGGCATCATTGCTGGCCTGGTTCTCCTTGGATCTGTGGT20.12746972594008923No Hit
GGACGGAGCGGGTGCGGTTCCTGGACAGATACTTCTATCACCAAGAGGAG20.12746972594008923No Hit
CCAGACCCAGGACACGGAGCTCGTGGAGACCAGGCCTGCAGGGGATGGAA20.12746972594008923No Hit
CCCCAAAACGCATATGACTCACCACGCTGTCTCTGACCATGAAGCCACCC20.12746972594008923No Hit
ACAGAGAACGTGGTGTGTGCCCTGGGCCTGACTGTGGGTCTGGTGGGCAT20.12746972594008923No Hit
ATCATCCAGGCCGAGTTCTATCTGAATCCTGACCAATCAGGCGAGTTTAT20.12746972594008923No Hit
CGGGGGCCCTGGCCCTGACCCAGACCTGGGCGGGCTCCCACTCCATGAGG20.12746972594008923No Hit
ACTGAGAGAGCCCAACGTCCTCATCTGTTTCATCGACAAGTTCACCCCAC20.12746972594008923No Hit
AGTCTTCCTGCCCAGGGAAGACCACCTTTTCCGCAAGTTCCACTATCTCC20.12746972594008923No Hit
AACCTGTCACCACAGGAGTGTCAGAGACAGTCTTCCTGCCCAGGGAAGAC20.12746972594008923No Hit
CGCCGCGAGTCCGAGGACGGAGCCCCGGGCGCCATGGATAGAGCAGGAGG20.12746972594008923No Hit
CCAGCCTGGACAGTCCTGTCACCGTGGAGTGGAAGGCACAGTCTGATTCT20.12746972594008923No Hit
CACCCTGAGGTGCTGGGCCCTGGGCTTCTACCCTGCGGAGATCACACTGA20.12746972594008923No Hit
GCCATACCCAGGACACGGAGCTCGTGGAGACCAGGCCTGCAGGGGATGGA20.12746972594008923No Hit
TCTGACCATGAGGCCACCCTGAGGTGCTGGGCCCTGAGCTTCTACCCTGC20.12746972594008923No Hit
TCCTGACCAATCAGGCGAGTTTATGTTTGACTTTGATGGTGATGAGATTT20.12746972594008923No Hit
CTAAACAAAGCTCTGATGCTGGGGGCCCTCGCCCTGACCACCGTGATGAG20.12746972594008923No Hit
CACGGACCCCCCCAAGACGCATATGACTCACCACGCTGTCTCTGACCATG20.12746972594008923No Hit
CAGGAATCATGGGCTATCAAAGAAGAACATGTGATCATCCAGGCCGAGTT20.12746972594008923No Hit
GGAGGAAGAGCTCAGATAGAAAAGGAGGGAGCTACTCTCAGGCTGCAAGC20.12746972594008923No Hit
CCACCCTGAGGTGCTGGGCCCTGGGTTTCTACCCTGCGGAGATCACACTG20.12746972594008923No Hit
TGAGGCCACCCTGAGGTGCTGGGCCCTGGGCTTCTACCCTGCGGAGATCA20.12746972594008923No Hit
AACCCTCGTCCTGCTACTCTCGGGGGCCCTGGCCCTGACCCAGACCTGGG20.12746972594008923No Hit
CCACCAGTGGTCAATGTCACGTGGCTTCGAAATGGAAAACCTGTCACCAC20.12746972594008923No Hit
TGGGCATTGTTGCTGGCCTGGCTGTCCTAGCAGTTGTGGTCATCGGAGCT20.12746972594008923No Hit
GGCTGCGACGTGGGGCCGGACGGGCGCCTCCTCCGCGGGCATAACCAGTA20.12746972594008923No Hit
GATGAGTCTCTCATCGCTTGTAAAGCCTGAGACAGCTGCCTGTGTGGGAC20.12746972594008923No Hit
CGGGCGGAGTTGGACACGGTGTGCAGACACAACTACGAGGTGGCGTTCCG20.12746972594008923No Hit
GGCCGCGGGGAGCCCCGCTTCATCTCTGTGGGCTACGTGGACGACACCCA20.12746972594008923No Hit
GCGCTTCCTCCGCGGGTACCAGCAGGACGCCTACGACGGCAAGGATTACA20.12746972594008923No Hit
TATGACTCACCACGCTGTCTCTGACCATGAAGCCACCCTGAGGTGCTGGG20.12746972594008923No Hit
ACTCTCAGGCTGCGTCCAGCGACAGTGCCCAGGGCTCTGATGTGTCTCTC20.12746972594008923No Hit
TTCTATCTGAATCCTGACCAATCAGGCGAGTTTATGTTTGACTTTGATGG20.12746972594008923No Hit
GACTGCCTGGCGGTGGCCTGAGTTCAGCAAATTTGGAGGTTTTGACCCGC20.12746972594008923No Hit
TTCCAGAAGTGGGTGGCTGTGGTGGTGCCTTCTGGACAGGAGCAGAGATA20.12746972594008923No Hit
GACAGATACTTCCATAACCAGGAGGAGAACGTGCGCTTCGACAGCGACGT20.12746972594008923No Hit
GAAGAAAATGGCCATAAGTGGAGTCCCTGTGCTAGGATTTTTCATCATAG20.12746972594008923No Hit
GAACAGCCCTGTGGAACTGAGAGAGCCCAACGTCCTCATCTGTTTCATCG20.12746972594008923No Hit
GGCCCGTGTGGCGGAGCAGTTGAGAGCCTACCTGGAGGGCACGTGCGTGG20.12746972594008923No Hit
ACCCTGCGCGGCTACTACAACCAGAGCGAGGCCGGTTCTCACACCATCCA20.12746972594008923No Hit
GGGGATCACTGACCAACAGGACACGGCCACCATCTGTGCAAGTAGCCAAA20.12746972594008923No Hit
TGGTCATCGGAGCTGTGGTCGCTGCTGTGATGTGTAGGAGGAAGAGTTCA20.12746972594008923No Hit
GTCCCTCACCATGGTCACCCTGATCACCCTGCCTCTGCTTTTCCTTCTGC20.12746972594008923No Hit
CCCTGAGGTGCTGGGCCCTGGGCTTCTACCCTGCGGAGATCACACTGACC20.12746972594008923No Hit
CTCTCAGGCTGCGTCCAGCGACAGTGCCCAGGGCTCTGATGTGTCTCTCA20.12746972594008923No Hit
AGCAGAGATACACATGCCATGTACAGCATGAGGGGCTGCCGAAGCCCCTC20.12746972594008923No Hit
GGTTCGACAGCGACGCCGCGAGTCCGAGGACGGAGCCCCGGGCGCCATGG20.12746972594008923No Hit
AATCCTGACCAATCAGGCGAGTTTATGTTTGACTTTGATGGTGATGAGAT20.12746972594008923No Hit
CTGTGGTCGCTGCTGTGATGTGGAGGAGGAAGAGCTCAGATAGAAAAGGA20.12746972594008923No Hit
TGCGGAGATCACACTGACCTGGCAGCGGGATGGGGAGGACCAGACCCAGG20.12746972594008923No Hit
TTGTACCAGTTTTACGGTCCCTCTGGCCAGTTCACCCATGAATTTGATGG20.12746972594008923No Hit
CCTCTGGCCAGTTCACCCATGAATTTGATGGAGATGAGCAGTTCTACGTG20.12746972594008923No Hit
AGCATGAGGGGCTGCCGAAGCCCCTCACCCTGAGATGGGAGCCGTCTTCC20.12746972594008923No Hit
TGTTCGCTGGAGCTGTGGTCGCTGCTGTGAGGTGGAGGAGGAAGAGCTCA20.12746972594008923No Hit
ACTTTGATGGTGATGAGATTTTCCATGTGGATATGGCAAAGAAGGAGACG20.12746972594008923No Hit
CAGTGCCGGACAGGATGTGCAGACACAACTACGAGCTGGGCGGGCCCATG20.12746972594008923No Hit
TCCTCCGCGGGTATGACCAGTACGCCTACGACGGCAAGGATTACATCGCC20.12746972594008923No Hit
GCTGGGCCCTGGGTTTCTACCCTGCGGAGATCACACTGACCTGGCAGCGG20.12746972594008923No Hit
GACAGGAGCAGAGATACACCTGCCATGTGCAGCATGAGGGTCTCCCCAAG20.12746972594008923No Hit
CCGAACCCTCGTCCTGCTACTCTCGGGGGCCCTGGCCCTGACCCAGACCT20.12746972594008923No Hit
GCCGAGGATGGCCGTCATGGCGCCCCGAACCCTCGTCCTGCTACTCTCGG20.12746972594008923No Hit
AGCTGTGTTCGCTGGAGCTGTGGTCGCTGCTGTGAGGTGGAGGAGGAAGA20.12746972594008923No Hit

[OK]Adapter Content

Adapter graph