FastQCFastQC Report
Tue 17 Feb 2026
sample1_T1_1.gz

Summary

[OK]Basic Statistics

MeasureValue
Filenamesample1_T1_1.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1377513
Sequences flagged as poor quality0
Sequence length35-301
%GC38

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACTACCGAAGTTGTAGGAGACATTATACTTAAACCAGCAAATAATAGTTT252561.8334491217142777No Hit
CTTTTCTCCAAGCAGGGTTACGTGTAAGGAATTCTCTTACCACGCCTATT251941.828948256749664No Hit
ACTAGGTTCCATTGTTCAAGGAGCTTTTTAAGCTCTTCAACGGTAATAGT245141.7795839313313195No Hit
TGATTTGAGTGTTGTCAATGCCAGATTACGTGCTAAGCACTATGTGTACA234321.701036578239189No Hit
CGACTACTAGCGTGCCTTTGTAAGCACAAGCTGATGAGTACGAACTTATG227831.6539226853031515No Hit
AGCCTCATAAAACTCAGGTTCCCAATACCTTGAAGTGTTATCATTAGTAA197611.434541815576332No Hit
TGAAATGGTGAATTGCCCTCGTATGTTCCAGAAGAGCAAGGTTCTTTTAA196661.4276453289370046No Hit
CATCCAGATTCTGCCACTCTTGTTAGTGACATTGACATCACTTTCTTAAA191581.390767274065653No Hit
ACAGTATTCTTTGCTATAGTAGTCGGCATAGATGCTTTAATTCTAGAATT184881.342128894609343No Hit
AGCAAAATGTTGGACTGAGACTGACCTTACTAAAGGACCTCATGAATTTT176691.2826739203187194No Hit
AAGGTGTCTGCAATTCATAGCTCTTTTCAGAACGTTCCGTGTACCAAGCA173611.2603147846880574No Hit
GTACGCGTTCCATGTGGTCATTCAATCCAGAAACTAACATTCTTCTCAAC161591.173056080051513No Hit
CGGTAATAAAGGAGCTGGTGGCCATAGTTACGGCGCCGATCTAAAGTCAT160451.16478029608432No Hit
CTCCTTTATCAGAACCAGCACCAAAATGTATAACTCTCATATTATAGGGT157681.144671592935965No Hit
AGTTTCCACACAGACAGGCATTAATTTGCGTGTTTCTTCTGCATGTGCAA155211.1267407276737136No Hit
GGTGTATACTGCTGCCGTGAACATGAGCATGAAATTGCTTGGTACACGGA151351.0987192135391826No Hit
AGGAATTACTTGTGTATGCTGCTGACCCTGCTATGCACGCTGCTTCTGGT150561.0929842404391104No Hit
ACACAGACCATTCCAGTAGCAGTGACAATATTGCTTTGCTTGTACAGTAA149561.0857247808187653No Hit
CACAAGTAGTGGCACCTTCTTTAGTCAAATTCTCAGTGCCACAAAATTCG149301.0838373213174757No Hit
GTTGATAAGTACTTTGATTGTTACGATGGTGGCTGTATTAATGCTAACCA145011.0526942395461967No Hit
ACCTGAAAGTCAACGAGATGAAACATCTGTTGTCACTTACTGTACAAGCA144361.0479755907929724No Hit
ACACGTGGTGTTTATTACCCTGACAAAGTTTTCAGATCCTCAGTTTTACA141651.0283024552218383No Hit
CCAGCAACTGTTTGTGGACCTAAAAAGTCTACTAATTTGGTTAAAAACAA139521.0128398062305037No Hit
AGTGAAATTGGGCCTCATAGCACATTGGTAAACACCAGATGGTGAACCAT137190.9959252653151005No Hit
TAACATGTTGTGCCAACCACCATAGAATTTGCTTGTTCCAATTACTACAG137010.9946185625834384No Hit
TGACGATGACTTGGTTAGCATTAATACAGCCACCATCGTAACAATCAAAG136370.9899725084264177No Hit
ACTCTGAACTCACTTTCCATCCAACTTTTGTTGTTTTTGTGGTAATAAAC132230.9599183455981904No Hit
AATAACGGTCAAAGAGTTTTAACCTCTCTTCCGTGAAGTCATATTTTAAC122550.8896467764732529No Hit
AAGAGTCCTGTTACATTTTCAGCTTGTAAAGTTGCCACATTCCTACGTGG114110.828376937277543No Hit
TCCCATCTGGTAAAGTTGAGGGTTGTATGGTACAAGTAACTTGTGGTACA113140.8213352614458085No Hit
TCACGCATGATGTTTCATCTGCAATTAACAGGCCACAAATAGGCGTGGTA112130.8140032072292602No Hit
CACCAGCTGTCCAACCTGAAGAAGAATCACCAGGAGTCAAATAACTTCTA110760.8040577475493879No Hit
ACTGTAGTGACAAGTCTCTCGCAACTTCATCACTAATAAATGTACTACCA105170.7634773682716606No Hit
CACAACTTGCGTGTGGAGGTTAATGTTGTCTACTGTTGTAAACACCTTAA102910.7470709895296814No Hit
ACAGGTTCATCTAAGTGTGTGTGTTCTGTTATTGATTTATTACTTGATGA99460.7220258538394919No Hit
AGGTCTTCCTTGCCATGTTGAGTGAGAGCGGTGAACCAAGACGCAGTATT99340.7211547186850505No Hit
CATCAGGAGATGCCACAACTGCTTATGCTAATAGTGTTTTTAACATTTGT89460.649431257636044No Hit
GTTGAGAGCAAAATTCATGAGGTCCTTTAGTAAGGTCAGTCTCAGTCCAA83360.6051485539519409No Hit
ACTACAGTCAGCTTATGTGTCAACCTATACTGTTACTAGATCAGGCATTA83250.604350013393703No Hit
AGGACTGGTATGATTTTGTAGAAAACCCAGATATATTACGCGTATACGCC81390.5908474184998618No Hit
GCAATTGTTTTTCAGCTATTTTGCAGTACATTTTATTAGTAATTCTTGGC81090.5886695806137583No Hit
TGAGGCTGGTTCTAAATCACCCATTCAGTACATCGATATCGGTAATTATA78850.572408391064186No Hit
TGCACATCAGTAGTCTTACTCTCAGTTTTGCAACAACTCAGAGTAGAATC77260.5608658502678378No Hit
GTTGTCCAACAATTACCTGAAACTTACTTTACTCAGAGTAGAAATTTACA74080.5377807686751414No Hit
GGAATTTGGTGCCACTTCTGCTGCTCTTCAACCTGAAGAAGAGCAAGAAG71950.5223181196838069No Hit
TCATCAGATTCAACTTGCATGGCATTGTTAGTAGCCTTATTTAAGGCTCC71020.5155668222368863No Hit
CAACCTTAGAAACTACAGATAAATCTTGGGATTTTATTATTTCAACAAAA68840.4997412002645347No Hit
AATACAAGCACCAAGGTCACGGGGTGTCATGTTTTCAACTTTGTTATAGG67220.48798087567957615No Hit
CACGTTCACCTAAGTTGGCGTATACGCGTAATATATCTGGGTTTTCTACA67200.4878356864871693No Hit
ACCACTAGTAGATACACAAACACCAGCTTCTGATCTTTCACAAGTGCCGT67030.4866015783517107No Hit
CCATGGCAGATTCCAACGGTACTATTACCGTTGAAGAGCTTAAAAAGCTC66210.4806488214630279No Hit
CAGTACGTTTTTGCCGAGGCTTCTTAGAAGCCTCAGCAGCAGATTTCTTA66060.47955990251997616No Hit
TGAGGGAGCCTTGAATACACCAAAAGATCACATTGGCACCCGCAATCCTG64260.4664928752033556No Hit
GTTCCCTTCCATCATATGCAGCTTTTGCTACTGCTCAAGAAGCTTATGAG63840.4634439021628108No Hit
GCACAACTAATGGTGACTTTTTGCATTTCTTACCTAGAGTTTTTAGTGCA63470.4607579021032832No Hit
GTTGAACCTTTCTACAAGCCGCATTAATCTTCAGTTCATCACCAATTATA63170.4585800642171798No Hit
TGTTGACACTGACTTAACAAAGCCTTACATTAAGTGGGATTTGTTAAAAT63100.45807190204375564No Hit
CAGCCCCTATTAAACAGCCTGCACGTGTTTGAAAAACATTAGAACCTGTA63090.45799930744755224No Hit
TGTCGCTTCCAAGAAAAGGACGAAGATGACAATTTAATTGATTCTTACTT61790.448562009941104No Hit
TAGATTACCAGAAGCAGCGTGCATAGCAGGGTCAGCAGCATACACAAGTA61030.443044820629642No Hit
AATTTGGAAGAAGCTGCTCGGTATATGAGATCTCTCAAAGTGCCAGCTAC59170.42954222573580064No Hit
CATCTTTAAGATGTTGACGTGCCTCTGATAAGACCTCCTCCACGGAGTCT58180.42235536071165936No Hit
AACCAAAAACTTGTCCATTAGCACACAATGGAAAACTAATGGGTGGTTTA57990.42097606338379384No Hit
ACTTGTGTTCCTTTTTGTTGCTGCATTCAGTTGAATCACCACAAATGTAC55600.40362595489116976No Hit
TGGACAGTAAACTACGTCATCAAGCCAAAGACCGTTAAGTGTAGTTGTAC55500.40290000892913536No Hit
CAATTTTGTAATGATCCATTTTTGGGTGTTTATTACCACAAAAACAACAA55230.4009399548316422No Hit
AGAGTCCAACCAACAGAATCTATTGTTAGATTTCCTAATATTACAAACTT55000.39927027911896296No Hit
ACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAA53380.3875099545340044No Hit
TGCCACAGTACGTCTACAAGCTGGTAATGCAACAGAAGTGCCTGCCAATT53230.3864210355909527No Hit
ACCTAGACCACCACTTAACCGAAATTATGTCTTTACTGGTTATCGTGTAA52520.38126681926050787No Hit
TAGGCTCTGTTGGTGGGAATGTTTTGTATGCGTCAATATGCTTATTCAGC52250.3793067651630148No Hit
CATGGCTGCATCACGGTCAAATTCAGATTTAGCCACATTCAAAGACTTCT50760.36849017032870107No Hit
TTTGTGCTTTTTAGCCTTTCTGCTATTCCTTGTTTTAATTATGCTTATTA49570.35985141338049076No Hit
AGGTGTGAGTAAACTGTTACAAACAACAACAGCAAGTTGCAAACAAAGTG49500.3593432512070666No Hit
ACACTATGCGAGCAGAAGGGTAGTAGAGAGCTAGGCCAATAGCAAAATGA48930.35520535922347013No Hit
TTCTGAGTACTGTAGGCACGGCACTTGTGAAAGATCAGAAGCTGGTGTTT48480.35193860239431496No Hit
GCTGTTATGTACATGGGCACACTTTCTTATGAACAATTTAAGAAAGGTGT48080.349034818546177No Hit
GGCACATGGCTTTGAGTTGACATCTATGAAGTATTTTGTGAAAATAGGAC47770.3467843860638702No Hit
AGGTTCCTGGCAATTAATTGTAAAAGGTAAACAGGAAACTGTATAATTAC47210.3427190886764771No Hit
TGTCCAACTTAGGGTCAATTTCTGTACAAACAACACCATCCAATTTATAA46450.33720189936501505No Hit
GCCAACAACAACAAGGCCAAACTGTCACTAAGAAATCTGCTGCTGAGGCT45380.32943427757124616No Hit
TGGTCAGAATAGTGCCATGGAGTGGCACGTTGAGAAGAATGTTAGTTTCT42980.3120115744824187No Hit
TGATAGAGACCTTTATGACAAGTTGCAATTTACAAGTCTTGAAATTCCAC42480.3083818446722463No Hit
ACAAACTGCCACCATCACAACCAGGCAAGTTAAGGTTAGATAGCACTCTA42320.30722033113299113No Hit
AACCTTTCCACATACCGCAGACGGTACAGACTGTGTTTTTAAGTGTAAAA42190.3062766013823463No Hit
AGCAGCATCTACAGCAAAAGCACAGAAAGATAATACAGTTGAATTGGCAG41200.29908973635820496No Hit
GTCCACACTCTCCTAGCACCATCATCATACACAGTTCTTGCTGTCATAAG40710.295532601144236No Hit
CCTACCTCCCTTTGTTGTGTTGTAGTAAGCTAACGCATTGTCATCAGTGC40580.2945888713935912No Hit
TCAATAGCCGCCACTAGAGGAGCTACTGTAGTAATTGGAACAAGCAAATT40110.29117692537202916No Hit
TCTTTATAGCCACGGAACCTCCAAGAGCTAGCTTTTGTTGTATAAACCCA39480.28660346581121193No Hit
ACCACCAACCTTAGAATCAAGATTGTTAGAATTCCAAGCTATAACGCAGC39360.28573233065677056No Hit
TGCTGTAGTTGTCTCAAGGGCTGTTGTTCTTGTGGATCCTGCTGCAAATT38410.27883584401744305No Hit
AGGCATGCCTTCTTACTGTACTGGTTACAGAGAAGGCTATTTGAACTCTA38230.277529141285781No Hit
GTAATTGAGCAGGGTCGCCAATGTACACATAGTGCTTAGCACGTAATCTG37630.27317346551357413No Hit
TGGTATGACAACCATTAGTTTGGCTGCTGTTGTAAGAGGTATTATGTTCA37440.27179416818570856No Hit
TGTCGCAAAATATACTCAACTGTGTCAATATTTAAACACATTAACATTAG37340.2710682222236741No Hit
ACTCAACTTTACTTAGGAGGTATGAGCTATTATTGTAAATCACATAAACC37100.26932595191479136No Hit
TGCAAGAGATGGTTGTGTTCCCTTGAACATAATACCTCTTACAACAGCAG35950.2609775733513949No Hit
ACATTCTAACCATAGCTGAAATCGGGGCCATTTGTACAAGATTAATTATT34780.2524840055955915No Hit
TTTGACTCCTTTGAGCACTGGCTCAGAGTCGTCTTCATCAAATTTGCAGC33670.2444260054170088No Hit
ACCAGTACAGTAGGTTGCAATAGTGACATTAGTAGAGTTCAAATAGCCTT33540.24348227566636393No Hit
CATGGCTGCATCACGGTCAAATCAGATTTAGCCACATTCAAAGACTTCTT33440.24275632970432948No Hit
TGAGTTAACAGGACACATGTTAGACATGTATTCTGTTATGCTTACTAATG33050.23992514045239502No Hit
GGTACCAACAGCTTCTCTAGTAGCATGACACCCCTCGACATCGAAGCCAA32920.23898141070175016No Hit
GGGCTATCATCTTATGTCCTTCCCTCAGTCAGCACCTCATGGTGTAGTCT32190.23368200517889848No Hit
TGTTAAGCGTGTTGACTGGACTATTGAATATCCTATAATTGGTGATGAAC31740.23041524834974333No Hit
ATTCTACACTCCAGGGACCACCTGGTACTGGTAAGAGTCATTTTGCTATT31700.23012486996492956No Hit
GCTTCAACAGCTTCACTAGTAGGTTGTTCTAATGGTTGTAAATCACCAGT31550.22903595102187782No Hit
TGTTCGCATTCAACCAGGACAGACTTTTTCAGTGTTAGCTTGTTACAATG31070.22555141040411236No Hit
TGTTTATCACCCGCGAAGAAGCTATAAGACATGTACGTGCATGGATTGGC28950.2101613560089814No Hit
CTTCTTTCTTTGAGAGAAGTGAGGACTTGTTCTTACCTTTCTTTTCCAAT28550.2072575721608435No Hit
GGGTGTGGACATTGCTGCTAATACTGTGATCTGGGACTACAAAAGAGATG28490.2068220045836228No Hit
AAACATGGAGGAGGTGTTGCAGGAGCCTTAAATAAGGCTACTAACAATGC28130.20420859912029868No Hit
AGTGCATTAACATTGGCCGTGACAGCTTGACAAATGTTAAAAACACTATT28070.20377303154307796No Hit
TTCACTCTTCATTTCCAAAAAGCTTGAAACAAGTTTGTCATAGAGATTTT27480.1994899503670746No Hit
ATGACAGCATCTGCCACAACACAGGCGAACTCATTTACTTCTGTACCGAG25650.18620513926184362No Hit
CTGTTTTACAGGTTCGCGACGTGCTCGTACGTGGCTTTGGAGACTCCGTG25610.18591476087702982No Hit
TGTAACTGGACACATTGAGCCCACAATTTAGATGATGATTCTACTCTGAG25590.18576957168462294No Hit
ACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACAAACT25510.18518881491499536No Hit
TCCTTTGCAACCTGAATTAGACTCATTCAAGGAGGAGTTAGATAAATATT24790.1799620039883471No Hit
ACAAAGAAAACAGTTACACAACAACCATAAAACCAGTTACTTATAAATTG24130.17517076063891954No Hit
ACTTTTGAAGAAGCTGCGCTGTGCACCTTTTTGTTAAATAAAGAAATGTA23420.17001654430847477No Hit
ACAGAATAAACACCAGGTAAGAATGAGTAAACTGGTGTTAAACAGAGTAC23240.1687098415768127No Hit
TAAGGATCAGTGCCAAGCTCGTCGCCTAAGTCAAATGACTTTAGATCGGC23070.16747573344135408No Hit
AGAGTTTCTTAGAGACGGTTGGGAAATTGTTAAATTTATCTCAACCTGTG23020.16711276046033685No Hit
GGCCCCAAGGTTTACCCAATAATACTGCGTCTTGGTTCACCGCTCTCACT22810.16558827394006445No Hit
TGCCAGAGATGTCACCTAAATCAACATCTGGTGATGTATGATTCTTAAAA22680.16464454418941962No Hit
GGTGTTGTTGGAGAAGGTTCCGAAGGTCTTAATGACAACCTTCTTGAAAT22280.1617407603412817No Hit
TGAGAAGTGCTCTGCCTATACAGTTGAACTCGGTACAGAAGTAAATGAGT22010.15978070624378862No Hit
AGCTTGTTTACCACACGTACAAGGTATCTGAACACCTTTCTTAAATTGTT20320.14751221948540594No Hit
ACGAAAGCAAGAAAAAGAAGTACGCTATTAACTATTAACGTACCTGTCTC19480.14141427340431634No Hit
ACGTGGCTTTATTAGTTGCATTGTTAACATGCCAAACAATAGGTTTATGT19410.1409061112308922No Hit
TCAGGTGATGGCACAACAAGTCCTATTTCTGAACATGACTACCAGATTGG19050.13829270576756808No Hit
GTGAAGTTCTTTTCTTGTGCAGGGACATAAGTCACATGCAAGAAGACTAC18910.13727638142071982No Hit
AGTATTGCCCTATTTTCTTCATAACTGGTAATACACTTCAGTGTATAATG18680.1356067057080405No Hit
TGGTGAAACTTCATGGCAGACGGGCGATTTTGTTAAAGCCACTTGCGAAT18600.13502594893841294No Hit
TGGTGAATACAGTCATGTAGTTGCCTTTAATACTTTACTATTCCTTATGT18440.13386443539915777No Hit
ACACACCACTGGTTGTTACTCACAATTTTGACTTCACTTTTAGTTTTAGT17930.1301621109927819No Hit
GAACAAAGACCATTGAGTACTCTGGACTAAAACTAAAAGTGAAGTCAAAA17730.12871021906871297No Hit
CATTTCATCTGTGAGCAAAGGTGGTCCCTGGAGTGTAGAATACTTTTGCA17240.12515308385474402No Hit
ATTGATGTTGACTTTCTCTTTTTGGAGTATTTCAAGAAGGTTGTCATTAA16880.12253967839141991No Hit
TCATCTAACCAATCTTCTTCTTGCTCTTCTTCAGGTTGAAGAGCAGCAGA16730.12145075944836818No Hit
TGTCAGTCATAGAACAAACACCAATAGTAGATATATGTGCTGGAGCATCT16590.12043443510151991No Hit
TACCGAAGTTGTAGGAGACATTATACTTAAACCAGCAAATAATAGTTTAA15350.1114327051722924No Hit
ATAAAGGAGCTGGTGGCCATAGTTACGGCGCCGATCTAAAGTCATTTGAC15030.10910967809378207No Hit
ACACACTGATTAAAGATTGCTATGTGAGATTAAAGTTAACTACATCTACT14810.10751259697730621No Hit
AGGGCAAACTGGAAAGATTGCTGATTATAATTATAAATTACCAGATGATT14680.10656886722666138No Hit
TCAATTTCCATTTGACTCCTGGGTTTAAATTCTTGTAAATTTCTACTCTG14650.10635108343805104No Hit
ACTGTGTTATGTATGCATCAGCTGTAGTGTTACTAATCCTTATGACAGCA14540.10555254287981312No Hit
TGGATGACAAAGATCCAAATTTCAAAGATCAAGTCATTTTGCTGAATAAG14370.1043184347443545No Hit
ATCAGAGGCTGCTCGTGTTGTACGATCAATTTTCTCCCGCACTCTTGAAA14360.10424584014815105No Hit

[OK]Adapter Content

Adapter graph