FastQCFastQC Report
Tue 17 Feb 2026
sample1_T1_2.gz

Summary

[OK]Basic Statistics

MeasureValue
Filenamesample1_T1_2.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1377513
Sequences flagged as poor quality0
Sequence length35-301
%GC38

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGACTACTAGCGTGCCTTTGTAAGCACAAGCTGATGAGTACGAACTTATG247311.7953369587074677No Hit
CTTTTCTCCAAGCAGGGTTACGTGTAAGGAATTCTCTTACCACGCCTATT240321.7445933359612575No Hit
TGATTTGAGTGTTGTCAATGCCAGATTACGTGCTAAGCACTATGTGTACA237961.727461011257244No Hit
ACTACCGAAGTTGTAGGAGACATTATACTTAAACCAGCAAATAATAGTTT220851.6032516571531448No Hit
ACTAGGTTCCATTGTTCAAGGAGCTTTTTAAGCTCTTCAACGGTAATAGT219561.5938869542429002No Hit
ACAGTATTCTTTGCTATAGTAGTCGGCATAGATGCTTTAATTCTAGAATT209981.524341331079997No Hit
AGCCTCATAAAACTCAGGTTCCCAATACCTTGAAGTGTTATCATTAGTAA197171.4313476533433804No Hit
TGAAATGGTGAATTGCCCTCGTATGTTCCAGAAGAGCAAGGTTCTTTTAA193621.4055765716911564No Hit
AAGGTGTCTGCAATTCATAGCTCTTTTCAGAACGTTCCGTGTACCAAGCA186211.3517839759044017No Hit
CATCCAGATTCTGCCACTCTTGTTAGTGACATTGACATCACTTTCTTAAA181771.3195519751900708No Hit
AGCAAAATGTTGGACTGAGACTGACCTTACTAAAGGACCTCATGAATTTT174541.267066082134978No Hit
GTACGCGTTCCATGTGGTCATTCAATCCAGAAACTAACATTCTTCTCAAC158751.152439214729734No Hit
AGTTTCCACACAGACAGGCATTAATTTGCGTGTTTCTTCTGCATGTGCAA151741.1015504027911172No Hit
GGTGTATACTGCTGCCGTGAACATGAGCATGAAATTGCTTGGTACACGGA150821.0948716999403998No Hit
ACACAGACCATTCCAGTAGCAGTGACAATATTGCTTTGCTTGTACAGTAA148961.0813691050465586No Hit
CGGTAATAAAGGAGCTGGTGGCCATAGTTACGGCGCCGATCTAAAGTCAT146621.064381969534952No Hit
CTCCTTTATCAGAACCAGCACCAAAATGTATAACTCTCATATTATAGGGT145941.0594455369931173No Hit
CACAAGTAGTGGCACCTTCTTTAGTCAAATTCTCAGTGCCACAAAATTCG143991.045289590733445No Hit
TAACATGTTGTGCCAACCACCATAGAATTTGCTTGTTCCAATTACTACAG143811.043982888001783No Hit
AGGAATTACTTGTGTATGCTGCTGACCCTGCTATGCACGCTGCTTCTGGT143171.0393368338447622No Hit
ACACGTGGTGTTTATTACCCTGACAAAGTTTTCAGATCCTCAGTTTTACA141811.0294639687610934No Hit
TGACGATGACTTGGTTAGCATTAATACAGCCACCATCGTAACAATCAAAG139041.0093552656127385No Hit
ACCTGAAAGTCAACGAGATGAAACATCTGTTGTCACTTACTGTACAAGCA138751.0072500223228384No Hit
GTTGATAAGTACTTTGATTGTTACGATGGTGGCTGTATTAATGCTAACCA131930.957740507712087No Hit
CCAGCAACTGTTTGTGGACCTAAAAAGTCTACTAATTTGGTTAAAAACAA131150.952078129208218No Hit
ACTCTGAACTCACTTTCCATCCAACTTTTGTTGTTTTTGTGGTAATAAAC126310.9169423446457492No Hit
TCCCATCTGGTAAAGTTGAGGGTTGTATGGTACAAGTAACTTGTGGTACA122480.8891386142998288No Hit
AGTGAAATTGGGCCTCATAGCACATTGGTAAACACCAGATGGTGAACCAT120340.873603370712291No Hit
AAGAGTCCTGTTACATTTTCAGCTTGTAAAGTTGCCACATTCCTACGTGG116480.8455818565777601No Hit
AATAACGGTCAAAGAGTTTTAACCTCTCTTCCGTGAAGTCATATTTTAAC110830.804565909722812No Hit
TCACGCATGATGTTTCATCTGCAATTAACAGGCCACAAATAGGCGTGGTA108220.7856187201137121No Hit
CACCAGCTGTCCAACCTGAAGAAGAATCACCAGGAGTCAAATAACTTCTA107200.7782140713009605No Hit
ACAGGTTCATCTAAGTGTGTGTGTTCTGTTATTGATTTATTACTTGATGA102250.7422797461802538No Hit
CACAACTTGCGTGTGGAGGTTAATGTTGTCTACTGTTGTAAACACCTTAA102170.7416989894106263No Hit
AGGACTGGTATGATTTTGTAGAAAACCCAGATATATTACGCGTATACGCC94720.6876160152390576No Hit
AGGTCTTCCTTGCCATGTTGAGTGAGAGCGGTGAACCAAGACGCAGTATT93240.6768720150009473No Hit
ACTGTAGTGACAAGTCTCTCGCAACTTCATCACTAATAAATGTACTACCA92880.6742586095376232No Hit
CATCAGGAGATGCCACAACTGCTTATGCTAATAGTGTTTTTAACATTTGT88480.6423169872081063No Hit
GCAATTGTTTTTCAGCTATTTTGCAGTACATTTTATTAGTAATTCTTGGC87210.6330974734902683No Hit
TCATCAGATTCAACTTGCATGGCATTGTTAGTAGCCTTATTTAAGGCTCC83920.609213851339334No Hit
TGAGGCTGGTTCTAAATCACCCATTCAGTACATCGATATCGGTAATTATA80700.5858383913618238No Hit
GTTGAGAGCAAAATTCATGAGGTCCTTTAGTAAGGTCAGTCTCAGTCCAA80600.5851124453997893No Hit
AATACAAGCACCAAGGTCACGGGGTGTCATGTTTTCAACTTTGTTATAGG77760.5644955800780102No Hit
TGCACATCAGTAGTCTTACTCTCAGTTTTGCAACAACTCAGAGTAGAATC75900.5509929851841688No Hit
CAACCTTAGAAACTACAGATAAATCTTGGGATTTTATTATTTCAACAAAA72060.523116660242045No Hit
ACTACAGTCAGCTTATGTGTCAACCTATACTGTTACTAGATCAGGCATTA71770.5210114169521449No Hit
CAGTACGTTTTTGCCGAGGCTTCTTAGAAGCCTCAGCAGCAGATTTCTTA69750.5063473085190484No Hit
GTTGTCCAACAATTACCTGAAACTTACTTTACTCAGAGTAGAAATTTACA69550.5048954165949795No Hit
CACGTTCACCTAAGTTGGCGTATACGCGTAATATATCTGGGTTTTCTACA68590.4979263353594486No Hit
GCACAACTAATGGTGACTTTTTGCATTTCTTACCTAGAGTTTTTAGTGCA67700.4914654162973417No Hit
CAGCCCCTATTAAACAGCCTGCACGTGTTTGAAAAACATTAGAACCTGTA65100.47259082128444524No Hit
TGAGGGAGCCTTGAATACACCAAAAGATCACATTGGCACCCGCAATCCTG63190.45872525340958675No Hit
TGTTGACACTGACTTAACAAAGCCTTACATTAAGTGGGATTTGTTAAAAT62110.45088503701961435No Hit
ACCACTAGTAGATACACAAACACCAGCTTCTGATCTTTCACAAGTGCCGT61530.44667455043981436No Hit
GTTGAACCTTTCTACAAGCCGCATTAATCTTCAGTTCATCACCAATTATA60950.44246406386001436No Hit
TAGATTACCAGAAGCAGCGTGCATAGCAGGGTCAGCAGCATACACAAGTA59850.4344786582776351No Hit
CCATGGCAGATTCCAACGGTACTATTACCGTTGAAGAGCTTAAAAAGCTC59780.433970496104211No Hit
GGAATTTGGTGCCACTTCTGCTGCTCTTCAACCTGAAGAAGAGCAAGAAG59000.42830811760034204No Hit
ACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAA58500.4246783877901697No Hit
AGAGTCCAACCAACAGAATCTATTGTTAGATTTCCTAATATTACAAACTT57650.41850784711287664No Hit
TGTCGCTTCCAAGAAAAGGACGAAGATGACAATTTAATTGATTCTTACTT57340.4162574146305697No Hit
ACACTATGCGAGCAGAAGGGTAGTAGAGAGCTAGGCCAATAGCAAAATGA57330.4161848200343663No Hit
TAGGCTCTGTTGGTGGGAATGTTTTGTATGCGTCAATATGCTTATTCAGC56880.4129180632052112No Hit
CATGGCTGCATCACGGTCAAATTCAGATTTAGCCACATTCAAAGACTTCT56610.410958009107718No Hit
AATTTGGAAGAAGCTGCTCGGTATATGAGATCTCTCAAAGTGCCAGCTAC55110.40006881967720087No Hit
GTTCCCTTCCATCATATGCAGCTTTTGCTACTGCTCAAGAAGCTTATGAG54870.3983265493683181No Hit
CATCTTTAAGATGTTGACGTGCCTCTGATAAGACCTCCTCCACGGAGTCT53140.38576768422512164No Hit
CAATTTTGTAATGATCCATTTTTGGGTGTTTATTACCACAAAAACAACAA52940.38431579230105267No Hit
AACCAAAAACTTGTCCATTAGCACACAATGGAAAACTAATGGGTGGTTTA52810.3833720625504079No Hit
ACTTGTGTTCCTTTTTGTTGCTGCATTCAGTTGAATCACCACAAATGTAC52100.37821784621996307No Hit
TGCCACAGTACGTCTACAAGCTGGTAATGCAACAGAAGTGCCTGCCAATT51750.3756770353528424No Hit
TTCTGAGTACTGTAGGCACGGCACTTGTGAAAGATCAGAAGCTGGTGTTT50870.369288710886939No Hit
TGGACAGTAAACTACGTCATCAAGCCAAAGACCGTTAAGTGTAGTTGTAC49860.3619566566703908No Hit
TGTCCAACTTAGGGTCAATTTCTGTACAAACAACACCATCCAATTTATAA49050.3560764943779115No Hit
TTTGTGCTTTTTAGCCTTTCTGCTATTCCTTGTTTTAATTATGCTTATTA48210.3499785482968219No Hit
AGGTTCCTGGCAATTAATTGTAAAAGGTAAACAGGAAACTGTATAATTAC47320.343517629234715No Hit
GGCACATGGCTTTGAGTTGACATCTATGAAGTATTTTGTGAAAATAGGAC46230.3356048182485392No Hit
ACCTAGACCACCACTTAACCGAAATTATGTCTTTACTGGTTATCGTGTAA45980.333789953343453No Hit
AGGTGTGAGTAAACTGTTACAAACAACAACAGCAAGTTGCAAACAAAGTG45240.3284179532243979No Hit
TGGTCAGAATAGTGCCATGGAGTGGCACGTTGAGAAGAATGTTAGTTTCT44430.3225377909319186No Hit
GCTGTTATGTACATGGGCACACTTTCTTATGAACAATTTAAGAAAGGTGT44300.3215940611812738No Hit
ACAAACTGCCACCATCACAACCAGGCAAGTTAAGGTTAGATAGCACTCTA44120.32028735844961176No Hit
GTAATTGAGCAGGGTCGCCAATGTACACATAGTGCTTAGCACGTAATCTG40170.29161249294924985No Hit
TGATAGAGACCTTTATGACAAGTTGCAATTTACAAGTCTTGAAATTCCAC40150.29146730375684293No Hit
TGGTATGACAACCATTAGTTTGGCTGCTGTTGTAAGAGGTATTATGTTCA39750.28856351990870505No Hit
GCCAACAACAACAAGGCCAAACTGTCACTAAGAAATCTGCTGCTGAGGCT39430.2862404928301947No Hit
GTCCACACTCTCCTAGCACCATCATCATACACAGTTCTTGCTGTCATAAG39340.28558714146436365No Hit
AACCTTTCCACATACCGCAGACGGTACAGACTGTGTTTTTAAGTGTAAAA38790.281594438673174No Hit
TCAATAGCCGCCACTAGAGGAGCTACTGTAGTAATTGGAACAAGCAAATT38770.28144924948076716No Hit
AGGCATGCCTTCTTACTGTACTGGTTACAGAGAAGGCTATTTGAACTCTA38680.2807958981149361No Hit
TGTCGCAAAATATACTCAACTGTGTCAATATTTAAACACATTAACATTAG38550.27985216836429133No Hit
AGCAGCATCTACAGCAAAAGCACAGAAAGATAATACAGTTGAATTGGCAG38340.2783276818440189No Hit
TGCAAGAGATGGTTGTGTTCCCTTGAACATAATACCTCTTACAACAGCAG37210.2701244924730293No Hit
CCTACCTCCCTTTGTTGTGTTGTAGTAAGCTAACGCATTGTCATCAGTGC37130.26954373570340173No Hit
TGCTGTAGTTGTCTCAAGGGCTGTTGTTCTTGTGGATCCTGCTGCAAATT36870.2676562762021121No Hit
TCTTTATAGCCACGGAACCTCCAAGAGCTAGCTTTTGTTGTATAAACCCA36500.2649702761425845No Hit
ACCACCAACCTTAGAATCAAGATTGTTAGAATTCCAAGCTATAACGCAGC35920.26075978956278456No Hit
TGAGTTAACAGGACACATGTTAGACATGTATTCTGTTATGCTTACTAATG34440.2500157893246742No Hit
GGGCTATCATCTTATGTCCTTCCCTCAGTCAGCACCTCATGGTGTAGTCT33650.24428081622460185No Hit
TTTGACTCCTTTGAGCACTGGCTCAGAGTCGTCTTCATCAAATTTGCAGC32680.23723914039286745No Hit
ACTCAACTTTACTTAGGAGGTATGAGCTATTATTGTAAATCACATAAACC32450.23556946468018813No Hit
GGTACCAACAGCTTCTCTAGTAGCATGACACCCCTCGACATCGAAGCCAA32110.2331012484092709No Hit
ACATTCTAACCATAGCTGAAATCGGGGCCATTTGTACAAGATTAATTATT32060.23273827542825368No Hit
ACCAGTACAGTAGGTTGCAATAGTGACATTAGTAGAGTTCAAATAGCCTT31520.2288181672332675No Hit
GCTTCAACAGCTTCACTAGTAGGTTGTTCTAATGGTTGTAAATCACCAGT31450.22831000505984336No Hit
AAACATGGAGGAGGTGTTGCAGGAGCCTTAAATAAGGCTACTAACAATGC27980.20311968017724694No Hit
ATTCTACACTCCAGGGACCACCTGGTACTGGTAAGAGTCATTTTGCTATT27970.2030470855810435No Hit
AGTGCATTAACATTGGCCGTGACAGCTTGACAAATGTTAAAAACACTATT27560.20007070713670216No Hit
CTTCTTTCTTTGAGAGAAGTGAGGACTTGTTCTTACCTTTCTTTTCCAAT27300.1981832476354125No Hit
TGTTAAGCGTGTTGACTGGACTATTGAATATCCTATAATTGGTGATGAAC27220.19760249086578494No Hit
TTCACTCTTCATTTCCAAAAAGCTTGAAACAAGTTTGTCATAGAGATTTT26700.19382757186320565No Hit
TGTAACTGGACACATTGAGCCCACAATTTAGATGATGATTCTACTCTGAG25790.18722146360869188No Hit
GGGTGTGGACATTGCTGCTAATACTGTGATCTGGGACTACAAAAGAGATG25710.18664070683906434No Hit
TCCTTTGCAACCTGAATTAGACTCATTCAAGGAGGAGTTAGATAAATATT25310.18373692299092642No Hit
CTGTTTTACAGGTTCGCGACGTGCTCGTACGTGGCTTTGGAGACTCCGTG25180.1827931932402816No Hit
CATGGCTGCATCACGGTCAAATCAGATTTAGCCACATTCAAAGACTTCTT25180.1827931932402816No Hit
TGTTCGCATTCAACCAGGACAGACTTTTTCAGTGTTAGCTTGTTACAATG25180.1827931932402816No Hit
TAAGGATCAGTGCCAAGCTCGTCGCCTAAGTCAAATGACTTTAGATCGGC24700.17930865262251608No Hit
TGTTTATCACCCGCGAAGAAGCTATAAGACATGTACGTGCATGGATTGGC24510.1779293552946506No Hit
ATGACAGCATCTGCCACAACACAGGCGAACTCATTTACTTCTGTACCGAG24340.17669524715919196No Hit
TGCCAGAGATGTCACCTAAATCAACATCTGGTGATGTATGATTCTTAAAA22440.16290227388053688No Hit
TGAGAAGTGCTCTGCCTATACAGTTGAACTCGGTACAGAAGTAAATGAGT22030.15992589543619554No Hit
AGAGTTTCTTAGAGACGGTTGGGAAATTGTTAAATTTATCTCAACCTGTG21970.15949032785897485No Hit
ACAAAGAAAACAGTTACACAACAACCATAAAACCAGTTACTTATAAATTG21690.15745767916527828No Hit
ACAGAATAAACACCAGGTAAGAATGAGTAAACTGGTGTTAAACAGAGTAC21580.15665913860704037No Hit
ACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACAAACT21490.15600578724120934No Hit
GGTGTTGTTGGAGAAGGTTCCGAAGGTCTTAATGACAACCTTCTTGAAAT20990.15237605743103697No Hit
ACTTTTGAAGAAGCTGCGCTGTGCACCTTTTTGTTAAATAAAGAAATGTA20770.1507789763145611No Hit
ACGTGGCTTTATTAGTTGCATTGTTAACATGCCAAACAATAGGTTTATGT20770.1507789763145611No Hit
TGGTGAAACTTCATGGCAGACGGGCGATTTTGTTAAAGCCACTTGCGAAT20320.14751221948540594No Hit
TGGTGAATACAGTCATGTAGTTGCCTTTAATACTTTACTATTCCTTATGT19980.1450440032144887No Hit
GTGAAGTTCTTTTCTTGTGCAGGGACATAAGTCACATGCAAGAAGACTAC19750.14337432750180942No Hit
ACGAAAGCAAGAAAAAGAAGTACGCTATTAACTATTAACGTACCTGTCTC19650.14264838153977494No Hit
AGCTTGTTTACCACACGTACAAGGTATCTGAACACCTTTCTTAAATTGTT18820.1366230300548888No Hit
TCAGGTGATGGCACAACAAGTCCTATTTCTGAACATGACTACCAGATTGG18700.1357518949004474No Hit
GGCCCCAAGGTTTACCCAATAATACTGCGTCTTGGTTCACCGCTCTCACT18590.13495335434220948No Hit
AGTATTGCCCTATTTTCTTCATAACTGGTAATACACTTCAGTGTATAATG18250.13248513807129225No Hit
GAACAAAGACCATTGAGTACTCTGGACTAAAACTAAAAGTGAAGTCAAAA17910.13001692180037502No Hit
ACACACCACTGGTTGTTACTCACAATTTTGACTTCACTTTTAGTTTTAGT16990.12333821894965782No Hit
TCATCTAACCAATCTTCTTCTTGCTCTTCTTCAGGTTGAAGAGCAGCAGA16550.12014405671670611No Hit
TGTCAGTCATAGAACAAACACCAATAGTAGATATATGTGCTGGAGCATCT16080.11673211069514408No Hit
ACACACTGATTAAAGATTGCTATGTGAGATTAAAGTTAACTACATCTACT15370.11157789436469928No Hit
CATTTCATCTGTGAGCAAAGGTGGTCCCTGGAGTGTAGAATACTTTTGCA15340.11136011057608892No Hit
ATTGATGTTGACTTTCTCTTTTTGGAGTATTTCAAGAAGGTTGTCATTAA15280.11092454299886825No Hit
TCAATTTCCATTTGACTCCTGGGTTTAAATTCTTGTAAATTTCTACTCTG14860.10787556995832345No Hit
AGGGCAAACTGGAAAGATTGCTGATTATAATTATAAATTACCAGATGATT14280.10366508337852347No Hit
TACCGAAGTTGTAGGAGACATTATACTTAAACCAGCAAATAATAGTTTAA14160.1027939482240821No Hit

[OK]Adapter Content

Adapter graph